Educational Course Lecture
ESCMID Global 2024
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Guidelines
From the archive: ECCMID and more before 2010
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03 September 2024
A technical perspective on metagenomics
30 April 2024
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O1189
Shotgun metagenomics on air: longitudinal surveillance of viral pathogens in a daycare centre
30 April 2024
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O1188
Solutions to unlock low-biomass air microbiome for public health pathogen and AMR surveillance using metagenomics
30 April 2024
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E1369
Enhancing infection diagnostic accuracy and antimicrobial resistance profiling in cirrhosis patients: a clinical metagenomics approach for positive blood culture samples
Merianne Mohamad, Veena Ramachandran, Dhaarica Jeyanesan, Marilena Stamouli, Jack Wright, Themis Charalampous, Kyle Leung, Ane Zamalloa, Tasneem Pirani, Vishal C. Patel,
Session: Advances in drug resistance testing
ePoster Flash Session
29 April 2024
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P1754
Cefiderocol resistance genes identified using functional metagenomics
29 April 2024
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E0827
A metagenomics-based diagnostic approach in patients with acute meningitis and encephalitis in Brazil
Noely Evangelista Ferreira, Antônio Charlys Da Costa, Michael G.Berg, Gavin A. Cloherty, Mary Rodgers, Cássia Gisele Terrassani Silveira, Ana Carolina Soares De Oliveira, Marina Farrel Côrtes, Tânia Regina Tozetto-Mendoza, Heuder Gustavo Oliveira Paião, Layla Honorato, Silvia Figueiredo Costa, Renan Barros Domingues, Carlos Senne, Esper G. Kallas, Maria Cássia Mendes-Correa
ePoster Flash Session
29 April 2024
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E0826
Target enriched metagenomics in cerebrospinal fluid in patients with a central nervous system infection
29 April 2024
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E0828
Culture-coupled nanopore metagenomics to detect extended-spectrum cephalosporin-resistant Enterobacterales (ESC-R-Ent) in stool
29 April 2024
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O1073
Metagenomics assists in the diagnosis of a refractory, culture-negative pyoderma gangrenosum-like ulcer caused by Helicobacter cinaedi in a patient with primary gammaglobulinemia
28 April 2024
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O0423
Real-life evaluation of clinical metagenomics from blood in clinical routine: experience of a large-scale, single-centre trial
Gülsah Cakas, Sandra Koch, Christian Hamm, Sebastian Wolf, Oliver Kriege, Daniel Grimm, Ingo Sagoschen, Daniel Schreiner, Marc Bodenstein, Tim Sparwasser, Ekkehard Siegel
2-hour Oral Session
28 April 2024
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O0427
Successes and lessons learnt from implementation of a routine clinical metagenomics service: eight years' experience
28 April 2024
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E0657
The drainome: metagenomics of sink wastewater on hospital wards can monitor antimicrobial resistance and identify reservoirs of carbapenamase-producing organisms
Luke Blagdon Snell, Adela Alcolea-Medina, Desiree Prossomariti, Mingaile Sasson, Michael Dibbens, Obaro Abadioru, Noor Al-Yaakoubi, Gul Humayun, Chris Alder, Alfredo Maldonado-Barrueco, Gaia Nebbia, Rahul Batra, Lisa Ryan, William Newsholme, Jonathan Edgeworth, Jon Otter, Simon Goldenberg
ePoster Flash Session
28 April 2024
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P1088
Thomasclavelia ramosa is a specific signature of hepatocellular carcinoma among patients with alcohol-related liver disease: a culturomics and metagenomics case-control study
27 April 2024
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P2213
Thoughts and perspectives of metagenome sequencing as a diagnostic tool for infectious diseases: an interpretive phenomenological study
27 April 2024
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P2214
Clinical metagenomics by nanopore sequencing to improve the success rate of respiratory pathogen identification
Amélia Rodrigues, Maria Cazelli, Ana Rita Ferreira, Margarida Eulálio, Sónia Ferreira, Ana Margarida Sousa
Session: 4h. Clinical metagenomics
Poster Session
27 April 2024
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P2215
Development of a comprehensive genomics (NGS) based test for the detection of anti-microbial resistance and sepsis
27 April 2024
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P2216
Rapid detection of pathogens directly from paediatric clinical specimens using an automated amplicon-based next generation sequencing pipeline
Lucas Osborn, John Fissel, Samantha Gomez, Javier Mestas, Jessica Flores-Vazquez, Jaehyeon Lee, Cristina Costales, Jennifer Dien Bard
Session: 4h. Clinical metagenomics
Poster Session
27 April 2024
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P2217
Analytical and clinical evaluation of tNGS and mNGS performance on suspected pulmonary infections in HIV patients
Ling Zhang, Feili Wei, Mei Zhang, Xia Ma, Shan Guo, Taiyi Jiang, Liu Yang, Wen Wang, Caiping Guo, Yulin Zhang
Session: 4h. Clinical metagenomics
Poster Session
27 April 2024
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P2218
Updated diagnostic performance of metagenomic next-generation sequencing in brain abscess
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