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ECCMID 2023
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Guidelines
From the archive: ECCMID and more before 2010
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13 June 2023
Genomics and metagenomics: data analyses and quality controls
Claire Bertelli
17 April 2023 - O1213
Microbiota resilience after Clostridioides difficile infection treatments
Elena Montenegro-Borbolla, Claire Bertelli, Benoît Guery
16 April 2023 - O1039
Concordance between upper and lower respiratory tracts microbiota in children with cystic fibrosis
Sedreh Nassirnia, Valentin Scherz, Gilbert Greub, Katia Jaton, Sebastien Papis, Klara Posfay-Barbe, Anne Mornand, Isabelle Rochat-Guignard, Claire Bertelli, Sandra Asner
15 April 2023 - P1807
Bioinformatics in phage therapy: from phage collections characterization to final products quality assessment
Alessia Carrara, Trestan Pillonel, Resch Grégory, Bertelli Claire
15 April 2023 - P1327
Gut microbiota profiles of Salmonella in patients: a path toward protection
Carmen Chen, Elena Montenegro-Borbolla, Michael Biggel, Roger Stephan, Gilbert Greub, Claire Bertelli, Benoît Guery
15 April 2023 - P1831
Lung and gut microbiota profiling in intensive care unit patients: a prospective pilot study
Antonios Kritikos, Eric Bernasconi, Yangji Choi, Valentin Scherz, Jean-Luc Pagani, Gilbert Greub, Claire Bertelli, Benoit Guery
14 April 2023 - P0949
zDB: bacterial comparative genomics made easy
Bastian Marquis, Alessia Carrara, Trestan Pillonel, Claire Bertelli
14 April 2023 - P0892
Fecal microbiota, another bites the dust
Adèle Rakotonirina, Carmen Chen, Elena Montenegro-Borbolla, Maxime Audry, Laurent Carrez, Marie Kroemer, Farshid Sadeghipour, Claire Bertelli, Benoît Guery, Eric Allémann, Tatiana Galperine
14 April 2023 - O0204
How much should we sequence? An analysis of the Swiss SARS-CoV-2 genomic surveillance effort
Fanny Wegner, Blanca Cabrera Gil, Christiane Beckmann, Claire Bertelli, Gilbert Greub, Adrian Härri, Hans Hirsch, Alexander Imhof, Michael Huber, Laurent Kaiser, Stephen Leib, Etleva Lleshi, Karoline Leuzinger, Gladys Martinetti, Richard Neher, Oliver Nolte, Alban Ramette, Maurice Redondo, Alexis Dumoulin, Milo Moraz, Lorenz Risch, Tim Roloff, Tanja Stadler, Araud Tanguy, Alexandra Trkola, Nadia Wohlwend, Cinzia Zehnder, Aitana Neves, Adrian Egli
24 April 2022 - O0761
16S amplicon-based metagenomics for pathogen detection in routine diagnostic clinical microbiology
Sedreh Nassirnia, Damien Jacot, Gilbert Greub, Claire Bertelli
24 April 2022 - O0583
Genomic investigation of the spatio-temporal SARS-CoV-2 spread during the first pandemic wave in the canton of Vaud, Switzerland
Yangji Choi, Damien Jacot, Anaïs Ladoy, David Deridder, Trestan Pillonel, Séverine Vuilleumier, Stéphane Joost, Claire Bertelli, Gilbert Greub
24 April 2022 - O0760
Metagenomic analysis of gut microbiota in COVID-19 patients
Yangji Choi, Tatiana Galperine, Jean-Luc Pagani, Matthaios Papadimitriou, Marie Méan, Valentin Scherz, Antonios Kritikos, Onya Opota, Gilbert Greub, Benoît Guery, Claire Bertelli
24 April 2022 - O0698
An under-reported complication of vascular surgery: two cases of periprosthetic Actinomyces odontolyticus infection
Giovanni Del Fabro, Davide Bertelli, Evelyn Van Hauwermeiren, Paola Lanza, Silvia Lorenzotti, Barbara Saccani, Benedetta Fumarola, Alice Mulè, Davide Laurenda, Manuela Migliorati, Alberto Matteelli, Liana Signorini
22 April 2022 - P1199
MeSS: a metagenomic sequence simulator for in silico sample generation
Farid Chaabane, Trestan Pillonel, Claire Bertelli
22 April 2022 - P1198
The virulome, a heterogeneous concept? Comparison of virulence factors and their conservation
Trestan Pillonel, Claire Bertelli, Florian Tagini, Gilbert Greub
22 April 2022 - P0636
Escherichia coli bloodstream infection from local epidemiology to antimicrobial stewardship: a prospective study
Giorgio Tiecco, Benedetta Fumarola, Erika Chiari, Filippo Castelnuovo, Francesco Castelli, Davide Angelo Bertelli
22 April 2022 - L0533
Within-host evolution of SARS-CoV-2 leading to casirivimab/imdevimab monoclonal antibodies treatment escape in an immunocompromised patient: successful treatment with convalescent vaccine-boosted plasma
Florian Tagini, Trestan Pillonel, Claire Bertelli, Matteo Monti, David Gachoud, Nathalie Rufer, Gilbert Greub
22 April 2022 - L0436
International external quality assessment for SARS-CoV-2 genome sequencing, variant and cluster identification
Claire Bertelli, Trestan Pillonel, Valeria Cagno, Gregory Mathez, Adrian Egli, Hege Vangstein Aamot, Gilbert Greub
22 April 2022 - P1811
Fusobacterium necrophorum: association of pathogenic determinants with four clinical presentations
Alessia Carrara, Claire Bertelli, Celine Gardiol, Bastian Marquis, Diego Andrey, Trestan Pillonel, Jacques Schrenzel, Gilbert Greub
11 July 2021 - 1624
Genomic island prediction and comparison to investigate bacterial evolution and outbreaks
Claire Bertelli, C. Bertelli
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