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From the archive: ECCMID and more before 2010
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12 July 2021 - 4526
Fourier-Transform Infrared (FTIR) spectroscopy for real-time strain typing of clinical isolates of Klebsiella pneumoniae and Acinetobacter baumannii and the rapid detection of bacterial outbreaks
Maria Piquet, M. Piquet, C. Pitart, Y. Zboromyrska, F. Marco, J. Vila, I. Roca Subira
12 July 2021 - 4428
Evaluation of the Alinity™ m STI Assay on genital and extragenital samples
Thibaut Poncin, T. Poncin (1, 2), M. Mainardis (1), J. Guiraud (3, 4), A. Braille (1), M. Mérimèche (1), F. Caméléna (1, H. Jacquier (1, C. Bébéar (3, B. Berçot (1
12 July 2021 - 3076
Analysis of vaginal microbiota of infertile patients undergoing treatment in Japan
Asami Matsumoto, A. Matsumoto (1, 2), Y. Yamagishi (1, 3), S. Takahashi (4), K. Miyamoto (2), A. Minemura (2), K. Oka (1, M. Takahashi (1, H. Mikamo (1
12 July 2021 - 3993
Impact of a multiplex molecular respiratory panel on antibiotic prescription and clinical management of immunocompromised adults with acute respiratory tract infections: a retrospective before-after study
Silvina Bergese, S. Bergese (1), B. Fox (1), N. García Allende (2), M.E. Elisiri (1), A.E. Schneider (1), I. Maldonado (1), J. Ruiz (3), S. Gonzalez Fraga (4), V. Rodriguez (2), L. Fernandez-Canigia (1)
12 July 2021 - 3730
Pathogen detection by metagenomic next-generation sequencing during neutropaenic fever in patients with haematological malignancies
Eduard Schulz, E. Schulz (1), S. Grumaz (2), B. Huber-Kraßnitzer (1), A. Deutsch (1), R. Krause (3), P. Neumeister (1)
12 July 2021 - 2512
Metagenomic analysis of the differential impact of ridinilazole and vancomycin on the gut microbiota in a phase II study
Esther Duperchy, E. Duperchy (1), A. Pallejà (2), O. Lukjancenko (2), N. Sørensen (2), H.B. Nielsen (2), D.J. Powell (1)
12 July 2021 - 3242
Improving group B Streptococcus detection in pregnant women at the Maternity School in Rio de Janeiro, Brazil
Debora Nery, D. Nery, M. Santos, L. Silva, L. Oliveira, A. Botelho, S. Fracalanzza, L. Teixeira, P. Saldanha, J. Amin Junior, T. Pinto
12 July 2021 - 2884
Digital integration of the rapid Vivalytic Analyser for the transfer of data of analytical results and quality assurance compliant with the guidelines of the German Medical Association (RiLiBäk)
Chantal Gitelman, C. Gitelman
12 July 2021 - 1955
Carbapenem-resistant Enterobacterales typing by Fourier transform infrared (FT-IR) spectroscopy analysis: is a real-time epidemiological investigation possible?
Elena De Carolis, E. De Carolis (1), G. Foglietta (2), M. Agosta (2), B. Posteraro (3), P. Bernaschi (2), C.F. Perno (2), M. Sanguinetti (1)
12 July 2021 - 1536
Metagenomic DNA sequencing for semi-quantitative pathogen detection from urine: a prospective clinical proof-of-concept study
Victoria A. Janes, V.A. Janes (1), S. Matamoros (1), P. Munk (2), P.T.L.C. Clausen (2), S.M. Koekkoek (1), L.A.M. Koster (3), M.E. Jakobs (3), B. De Wever (1), C.E. Visser (1), F.M. Aarestrup (2), O. Lund (2), M.D. De Jong (1), P.M.M. Bossuyt (4), D.R. Mende (1), C. Schultsz (1, 5)
12 July 2021 - 2850
Fast and direct bacterial identification from synovial and ascitic fluids inoculated in blood culture bottles by MALDI-TOF MS for better management of infected patients
Romain Lotte, R. Lotte (1, 2, 3), A. Courdurié (4), A. Gaudart (1), A. Emery (1), A. Chevalier (1), M. Payen (1, R. Ruimy (1
12 July 2021 - 1789
Analysis of non-typhoid Salmonella using Fourier-transformed infrared spectroscopy allows prediction of clinically relevant serogroups and serotypes
Maria del Rosario Almela-Ferrer, M.D.R. Almela-Ferrer (1, 2), A. Aguirre-Quiñonero (1, J.I. López-Mirones (1, S. Hernáez-Crespo (1, A. Canut-Blasco (1
12 July 2021 - 471
Early growth detection and identification of urinary tract infection pathogens
Brandon Pfrommer, B. Pfrommer (1), N. Kok (2), J. Kinderman (2), J. Winfree (1), A.M. Cardenas (1)
12 July 2021 - 2470
Molecular characterisation of a Klebsiella pneumoniae carbapenemase (KPC)-producing bacteria outbreak from the intensive care unit (ICU) of an Italian COVID-19 hospital
Federica Caviglia, F. Caviglia (1), S. Samantha (2), R. Isabella (2), G. Elisa (1)
12 July 2021 - 2212
Typing of Listeria monocytogenes by Fourier transform infrared (FTIR) spectroscopy
Marian Awad, M. Awad, M. Cordovana, S. Hecht, N. Mauder, B. Oberheitmann, M. Kostrzewa
12 July 2021 - 2133
A deep learning model for Mycobacterium abscessus complex subspecies identification with MALDI-TOF MS
Alexandre Godmer, A. Godmer (1, 2), N. Mohammad (3, 4), L. Benzerara (1), A.C. Normand (3), N. Veziris (1, R. Piarroux (3, A. Aubry (1
12 July 2021 - 1984
Investigation of MALDI-TOF mass spectrometry as a tool for assessing the genetic diversity of Campylobacter jejuni: a One Health approach
Maureen Feucherolles, M. Feucherolles (1), M. Nennig (2, 3), H.M. Cauchie (1), D. Martiny (4), S.L. Becker (5, 6, 7), S. Losch (8), C. Penny (1), C. Ragimbeau (2)
12 July 2021 - 456
Successful transition from phenotypic to in silico serotyping of Salmonella and Escherichia coli for accredited use for diagnostics and surveillance
Kim Van Der Zwaluw, K. Van Der Zwaluw, A. Hernandez Segura, I. Friesema, A. Van Hoek, S. Kuiling, K. Mooijman, A. Verbruggen, E. Franz, T. Bosch, M.J.C. Van Den Beld
12 July 2021 - 85
Pilot evaluation of machine learning for the classification of Streptococcus pneumoniae PCV-13 serotypes from non-PCV13 serotypes based on MALDI-TOF mass spectrometry analysis
Jonathan Zintgraff, J. Zintgraff, M.F. Rocca, D. Napoli, N. Sanchez Eluchans, M.L. Moscoloni, C. Lara
12 July 2021 - 1
Association between sexually transmitted infections and female reproductive tract diseases: findings from a case-control study in Southeast China
Wen-Tyng Kang, W.T. Kang (1), Y. Liao (1), Q. Guo (2), Y. Xu (1), Q. Huang (1), Q. Li (1)
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