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ESCMID Global 2024
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From the archive: ECCMID and more before 2010
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02 September 2024
How to make sense of it? Bioinformatic analyses I
Helena Seth-Smith, Alexander Hesselberg Løvestad, Natacha Couto
18 April 2023 - O1220
Widespread and ongoing convergence of antibiotic resistance and virulence traits in Klebsiella pneumoniae though plasmid hybridisation in One Health settings
Edward Feil, Marjorie Gibbon, Keira Cozens, Matthew Avison, Natacha Couto
18 April 2023 - O1146
Dynamics of carbapenemase-encoding genes in a global large-scale genomic dataset of WHO priority pathogens (AMRwatch)
Natacha Couto, Silvia Argimón, Julio Diaz Caballero, Corin Yeats, Khalil Abudahab, Diana Connor, David Aanensen
18 April 2023 - LB120
Biogeography, ecology, and diversity of resistance plasmids
Natacha Couto, Marjorie Gibbon, Harry Thorpe, Keira Cozens, Sergio Arredondo-Alonso, Jukka Corander, Matthew B. Avison, Edward J. Feil
14 September 2022 - P3-30
The global diversity and distribution of Klebsiella pneumoniae plasmids carrying the aerobactin encoding locus iuc3 isolated from clinical and non-clinical settings.
Edward Feil, Marjorie Gibbon, Natacha Couto, Samia Habib, Keira Cozens
14 September 2022 - P4-5
Characterisation and comparison of Klebsiella species from wastewater, healthcare-settings and crops in Quetta City, Pakistan.
Samia Habib, Marjorie Gibbon, Barbara Kasprzyk-Hordern, Natacha Couto, Edward J. Feil
25 April 2022 - O0636
The plasmid-borne virulence factor aerobactin (lineage iuc3) is strongly associated with isolates of Klebsiella pneumoniae from pigs and ducks.
Marjorie Gibbon, Natacha Couto, Keira Cozens, Amy Coates, Damien Thiry, Sebastien Breurec, Sylvain Brisse, Edward Feil
23 April 2022 - P1187
Optimised 16S metagenomics versus shotgun metagenomics with long-read sequencing technology for diagnostic use
Amelia Björnberg, Nilay Peker, Jean-Luc Tison, Marita Ekström, David Nestor, Bianca Stenmark, Bhanu Sinha, Natacha Couto, John Rossen, Martin Sundqvist, Paula Mölling
23 April 2022 - P0938
Modelling the transmission of Klebsiella species across different One Health settings using a very large genomics dataset
Harry Thorpe, Ross Booton, Teemu Kallonen, Marjorie Gibbon, Natacha Couto, Virginie Passet, Juan Sebastian Lopez Fernandez, Carla Rodrigues, Louise Matthews, Sonia Mitchell, Richard Reeve, Sophia David, Cristina Merla, Marta Corbella, Carolina Ferrari, Francesco Comandatore, Sylvain Brisse, Davide Sassera, Jukka Corander, Edward Feil
23 April 2022 - P0939
Large-scale One Health genomic survey of third-generation cephalosporin- and carbapenem-resistant Enterobacteriaceae in Thailand
Natacha Couto, Marjorie Gibbon, Keira Cozens, Punyawee Dulyayangkul, Nisanart Charoenlap, Skorn Mongkolsuk, Nuchanart Rangkadilok, Jutamaad Satayavivad, Kwanrawee Sirikanchana, Tawit Suriyo, Boonrat Chantong, Aronrag Meeyai, Varapon Montrivade, Kornrawan Phoonsawad, Walasinee Sakcamduang, Luechai Sringernyuang, Sarin Suwanpakdee, Kantima Wichuwaranan, Anuwat Wiratsudakul, Parntep Ratanakorn, Nour Alhusein, Ross D Booton, Virginia C Gould, Helen Lambert, Kristen K Reyher, Hannah Schubert, Katherine M E Turner, Lucy Vass, Henry Buller, Emma Pitchforth, Andrew C Singer, Greco Mark Malijan, Visanu Thamlikitkul, Matthew B Avison, Ed J Feil
12 July 2021 - 2654
The CHASRI element, encoding resistance to heavy metals, is associated with Klebsiella isolates from hospital patients and may be co-selected alongside antibiotic resistance
Natacha Couto, N. Couto (1), H. Thorpe (2), M. Gibbon (1), R. Phillips (1), S. Brisse (3), C. Parada Rodrigues (3), S. David (4), C. Merla (5), M. Corbella (5), C. Ferrari (5), D. Sassera (5), J. Corander (2), E.J. Feil (1)
09 July 2021 - 2637
Diversity of plasmids in a large collection of Klebsiella spp. strains from clinical and non-clinical settings
Natacha Couto, N. Couto (1), R. Phillips (2), H. Thorpe (3), M. Gibbon (1), S. Brisse (4), C. Parada Rodrigues (4), S. David (5), C. Merla (6), M. Corbella (6), C. Ferrari (6), D. Sassera (6), J. Corander (3), E.J. Feil (1)
09 July 2021 - 3093
Diversity of yersiniabactin in Klebsiella ornithinolytica from clinical and non-clinical settings
Natacha Couto, N. Couto (1), W. Phillips (1), H. Thorpe (2), M. Gibbon (1), S. Brisse (3), C. Parada Rodrigues (3), S. David (4), C. Merla (5), M. Corbella (5), C. Ferrari (5), D. Sassera (5), J. Corander (2), E.J. Feil (1)
20 September 2019
SOLIDNESS - Surveillance Of mobiLome meDiated aNtibiotic rEsiStance Spread
Natacha Couto, Natacha Couto | John Rossen
20 September 2019
Identification and typing of dengue viruses directly from patient samples with DEN-IM
Mario N. Ramirez, Catarina Mendes | Erley Lizarazo | Miguel Machado | Diogo Silva | Adriana Tami | Mario N. Ramirez | Natacha Couto | John Rossen | Joao A. Carrico
16 April 2019 - P2393
Molecular characterisation of Staphylococcus aureus from bloodstream infections at a university hospital in the Netherlands
Natacha Couto, Clara Lejarraga, Siobhan Brushett, Monika Chlebowicz, Alexander W. Friedrich, John Rossen
16 April 2019 - P2750
Biocide and antibiotic cross-resistance in veterinary medicine: Is there a link?
Filipa Trigo da Roza, Natacha Couto, Eva Cunha, John W. A. Rossen, Manuela Oliveira, Luís P Lamas
16 April 2019 - O1003
DEN-IM: dengue virus identification from metagenomic sequencing data
Catarina Mendes, Erley Lizarazo Forero, Miguel Machado, Diogo N Silva, Adriana Tami, Mario N. Ramirez, Natacha Couto, John W. A. Rossen, Joao A. Carrico
15 April 2019 - P1476
Characterisation of beta-lactamase CMY-2 gene and bacteriocin-encoding plasmids of ST131 ExPEC using MinION and Illumina sequencing and evaluation of its potential role in the virulence mechanisms
Ana Carolina Da Cruz Campos, Nathalia Lucas Silva Andrade, Francis M Cavallo, Jan Maarten Van Dijl, Erwin G. Raangs, Monika Chlebowicz, Natacha Couto, Paulo Vieira Damasco, Ana Cláudia Paula Rosa Ignácio, Alexander W. Friedrich, John W A Rossen
14 April 2019 - O0516
Detection of a mobile colistin resistance (mcr-5) gene in hospital tap water using short- and long-read shotgun metagenomics sequencing
Giuseppe Fleres, Natacha Couto, Monika Chlebowicz, John W. A. Rossen, Alexander W. Friedrich, Silvia García-Cobos
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