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ECCMID 2023
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From the archive: ECCMID and more before 2010
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16 April 2023 - O1036
Direct-from-blood culture metagenomic sequencing provides accurate antimicrobial resistance predictions faster than routine methods
Kumeren Govender, Teresa Street, Nicole Stoesser, David Eyre
16 April 2023 - P2445
Risk of SARS-CoV-2 BA.4/5 reinfection in the UK general population
Jia Wei, Philippa Matthews, Nicole Stoesser, Ian Diamond, Ruth Studley, Nick Taylor, Timothy Peto, Sarah Walker, Koen Pouwels, David Eyre
16 April 2023 - P2837
Nanopore whole genome sequencing of community and hospital influenza in the United Kingdom, 2022-2023
Jennifer Cane, Teresa Street, Nicholas Sanderson, Jeremy Swann, Alison Vaughan, Marcus Morgan, Gerald Jesuthasan, Ian Diamond, Ruth Studley, Nick Taylor, Hugh Boothe, Muhammad Ehsaan, Eric Haduli, Nicole Stoesser, Sophie Barnett, A. Sarah Walker, David W Eyre
15 April 2023 - E0725
SARS-CoV-2 sequencing in a routine NHS laboratory contributing to national surveillance
Bede Constantinides, Laura Dunn, Jeremy Swann, Hermione Webster, Bernadette Young, Timothy Peto, Nicole Stoesser, Katie Jeffery, Derrick Crook
15 April 2023 - P1819
Validation of boric acid as a preservative for hospital sink p-trap aspirates during transportation
Gillian Rodger, Kevin Chau, Paz Aranega Bou, Aysha Roohi, Ginny Moore, Katie Hopkins, Susan Hopkins, Sarah Walker, Nicole Stoesser
15 April 2023 - E0710
Neonatal bacteraemia at secondary hospitals in Kenya (NeoBACs)
Caroline Tigoi, Samuel Lipworth, Jalemba Aluvaala, Robert Onsare, Molly Timbwa, Anne Gaichiumia, Shalton Mwaringa, Robert Musyimi, Natalia Kapel, Hermione Webster, Gillian Rodger, Nicole Stoesser, James Berkley
15 April 2023 - O0431
Fine-scale spatial and longitudinal survey of AMR prevalence, antibiotic prescribing and antibiotic residues across Oxfordshire wastewater treatment works (WWTWs)
Kevin Chau, Natalie Sims, Karen Easterbrook, Richard Whinton, Karina-Doris Vihta, Emma Pritchard, Howard Brett, Jennifer Hughes, Robert Pritchard, Barbara Kasprzyk-Hordern, Soon Gweon, Derrick Crook, Daniel Read, Sarah Walker, Nicole Stoesser
14 April 2023 - P0532
Quantifying the effects of antibiotic resistance gene presence on antibiotic susceptibility phenotypes in Escherichia coli
Sam Lipworth, Derrick Crook, David Eyre, Tim Peto, A. Sarah Walker, Nicole Stoesser
14 April 2023 - O0256
Evaluation of potential coverage of a nine valent O-antigen vaccine for extraintestinal pathogenic Escherichia coli infections
Matthew Colpus, Kevin Chau, Paul Turner, Nazla Luthfee, Andrew Pollard, Dominic Kelly, Derrick Crook, Sarah Walker, Nicole Stoesser, Samuel Lipworth
14 April 2023 - P0359
Rapid antibiotic susceptibility testing of cultured Escherichia coli using a combination of high-resolution fluorescence microscopy, cellular phenotyping, and machine learning
Conor Feehily, Alexander Zagajewski, Stelios Chatzimichail, Piers Turner, Alison Farrar, Monique Andersson, Lucinda Barrett, Sarah Oakley, Derrick Crook, Christoffer Nellåker, Achillefs N Kapanidis, Nicole Stoesser
25 April 2022 - O0963
Evaluation of metagenomic, 16S rRNA and ultra-high multiplexed PCR-based sequencing approaches for profiling AMR and taxonomic composition of a well-defined DNA mock
Kevin Chau, Samuel Lipworth, Lindsay Newbold, Holly Tipper, Derrick Crook, Sarah Walker, Daniel Read, Nicole Stoesser
23 April 2022 - O0493
Genome wide association study reveals pathogen genomic factors associated with patient outcome in Escherichia coli bloodstream infections
Samuel Lipworth, Karina Vihta, Kevin Chau, Leanne Barker, Sophie George, James Kavanagh, Timothy Davies, Alison Vaughan, Monique Andersson, Katie Jeffery, Sarah Oakley, Marcus Morgan, Susan Hopkins, Timothy Peto, Derrick Crook, Ann Sarah Walker, Nicole Stoesser
22 April 2022 - P1394
Single-centre UK experience of once weekly dalbavancin for the treatment of invasive Gram-positive infections in vulnerable groups
Benedict Porter, Susanne Hodgson, Lorna Masson, Louise Dunsmure, Nicole Stoesser
22 April 2022 - P0612
New Delhi metallo-ß-lactamase (NDM) plasmid heterogeneity among carbapenemase-producing Escherichia coli and Klebsiella pneumoniae in the Netherlands from 2014-2019
Antoni Hendrickx, Samuel Lipworth, Fabian Landman, William Matlock, Sandra Witteveen, Ed Kuijper, Daan Notermans, Nicole Stoesser, Leo Schouls
22 April 2022 - B0003
Genomic confirmation of an outbreak of NRCS-A Staphyloccoccus capitis associated with late-onset sepsis on the neonatal intensive care unit (NICU)
Emily Lees, Jessica Gentry, Hermione Webster, Nicholas Sanderson, Teresa Street, Nicole Stoesser, Sarah Oakley, Dianne Newbury, Katie Jeffery, Stéphane Paulus, Bernadette Young, Derrick Crook
22 April 2022 - P2097
Midnight: a faster and cheaper alternative to ARTIC for SARS-CoV-2 sequencing
Bede Constantinides, Hermione Webster, Laura Dunn, Sarah Oakley, Lucinda Barrett, Jeremy Swann, Nicholas Sanderson, Philip Fowler, Geoffrey Ma, Gillian Rodger, Katie Jeffery, Timothy Peto, Nicole Stoesser, Teresa Street, Derrick Crook
11 July 2021 - 3419
Large scale hybrid assembly reveals the plasmid landscape associated with Gram-negative bloodstream infections
Sam Lipworth, S. Lipworth (1), W. Matlock (1), K. Chau (1), L. Barker (1), S. George (1), J. Kavanagh (1), T. Davies (1), A. Vaughan (1), M. Andersson (2), K. Jeffery (2), S. Oakley (2), M. Morgan (2), N. Sanderson (1), J. Swann (1), S. Hopkins (3), T. Peto (1), D. Crook (1), A.S. Walker (1), N. Stoesser (1)
10 July 2021 - 3371
Flanker reveals differential carbapenem susceptibility associated with blaOXA-48 flanking sequences
Sam Lipworth, S. Lipworth (1), W. Matlock (1), B. Constantinides (1), T. Peto (1), A.S. Walker (1), D. Crook (1), S. Hopkins (2), L. Shaw (1), N. Stoesser (1)
13 April 2019 - P1224
Longitudinal sampling of patients and wastewater sites in an endemic blaKPC-carbapenemase context demonstrates high levels of colonisation, genetic diversity and rapid genetic flux
Nicole Stoesser, Ryan George, Hang Phan, Mark Neilson, Aiysha Ali, Andrew Dodgson, Julie Cawthorne, David Wyllie, Zoie Aiken, Cheryl Lenney, Oluwafemi Akinremi, Ali Vaughan, Tim Peto, Ann Sarah Walker, Derrick Crook
22 April 2018 - P1697
Pipeline analysis of the global development of antibiotics and nontraditional approaches
Nicole Stoesser, D. Visi, J. Thomas, K. Talkington
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