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ESCMID Global 2024
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From the archive: ECCMID and more before 2010
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30 April 2024 - P3338
Core genome multi-locus sequence typing (cgMLST) reveals a long-term silent outbreak with the rare MRSA ST4110 in outpatient wound care
Jonas Krähemann, Helena Seth-Smith, Tim Roloff, Kathrin Herzog, Matthias Schlegel, Adrian Egli, Danielle Vuichard-Gysin
27 April 2024 - P2170
Comparing Illumina and Nanopore for bacterial whole genome sequencing in clinical microbiology
Srinithi Purushothaman, Marco Meola, Tim Roloff, Adrian Egli, Helena Seth-Smith
27 April 2024 - E0182
Toxin or no toxin? Challenges in molecular diagnostics of Corynebacterium diphtheriae
Frank Imkamp, Vladimira Hinic, Tim Roloff, Peter Schreiber, Walter Zingg, Adrian Egli
27 April 2024 - E0080
The global Capnocytophaga consortium: first look into genomic diversity of C. canimorsus, a notorious zoonotic pathogen 
Zoja Germuskova, Miroslava Barancekova, Alois Cizek, Tim Roloff Handschin, Parham Sendi, Torgny Sunnerhagen, Marc Westerholt, Els M Broens, Francesco Renzi, Kirstine Kobberøe Søgaard, Adrian Egli
27 April 2024 - E0384
Challenging genomics: Chlamydia trachomatis LGV genomes from clinical samples elucidate dynamics and novel lineage from Buenos Aires 
Karina Andrea Büttner, Fanny Wegner, Vera Bregy, Frank Imkamp, Srinithi Purushothaman, Tim Roloff Handschin, Andrea Carolina Entrocassi, Maria Lucía Gallo Vaulet, Deysi López Aquino, Luciana La Rosa, Laura Svidler López, Mirja H Puolakkainen, Eija Hiltunen-Back, Björn Hermann, Adrian Egli, Helena Seth-Smith, Marcelo Rodríguez Fermepin
17 April 2023 - E0825
Ongoing European outbreak of Corynebacterium diphtheriae among asylum seekers: situational report illuminated through whole genome sequencing (WGS)
Helena Seth-Smith, Edgar Badell, Anja Berger, Marion Blaschitz, Joshua D'Aeth, Alexandra Dangel, Kateřina Fabiánová, Norman Fry, Vladimira Hinic, Frank Imkamp, Alexander Indra, Geraldine Jost, Nadia Liassine, Kathrin Lippert, David Litt, Glady Martinetti, Tim Roloff, Stephanie Schindler, Salome Seiffert, Annika Sprenger, Jana Zavadilová, Oliver Nolte, Sylvain Brisse, Sonja Pleininger, Andreas Sing, Adrian Egli
16 April 2023 - P1848
Evaluation of long-read shotgun metagenomic protocols using nanopore sequencing for fast taxonomic and antimicrobial resistance detection
Srinithi Purushothaman, Marco Meola, Stefanie Heller, Tim Roloff, Adrian Egli
16 April 2023 - P1504
Comparison of disk diffusion, E-test, and broth microdilution methods for testing in vitro activity of cefiderocol against carbapenem-resistant Acinetobacter baumannii
Natalia Kolesnik-Goldmann, Klara Haldimann, Frank Imkamp, Tim Roloff, Helena Seth-Smith, Reinhard Zbinden, Adrian Egli, Sven Hobbie, Stefano Mancini
16 April 2023 - P1805
NOVA (Novel Organism Verification and Analysis) study: systematic identification of potentially novel bacterial species among a diverse spectrum of clinical isolates
Helena M.B. Seth-Smith, Veronika Muigg, Kai-Manuel Adam, Vladimira Hinic, Annette Blaich, Tim Roloff, Adrian Egli, Ulrich Heininger, Hanna Schmid, Maurus Kohler, Lukas Graf, Daniel Goldenberger
16 April 2023 - P1834
C. difficile abundance and gut microbiota composition in the first three weeks after antimicrobial treatment for C. difficile infection
Achermann Yvonne, Thomas C. Scheier, Chantal Quiblier, Natalia K. Kuleta, Diana Albertos-Torres, Tim Roloff-Handschin, Marco Meola, Frank Imkamp, Reinhard Zbinden, Silvio D. Brugger, Adrian Egli, Isabelle Frey-Wagner
15 April 2023 - O0204
How much should we sequence? An analysis of the Swiss SARS-CoV-2 genomic surveillance effort
Fanny Wegner, Blanca Cabrera Gil, Christiane Beckmann, Claire Bertelli, Gilbert Greub, Adrian Härri, Hans Hirsch, Alexander Imhof, Michael Huber, Laurent Kaiser, Stephen Leib, Etleva Lleshi, Karoline Leuzinger, Gladys Martinetti, Richard Neher, Oliver Nolte, Alban Ramette, Maurice Redondo, Alexis Dumoulin, Milo Moraz, Lorenz Risch, Tim Roloff, Tanja Stadler, Araud Tanguy, Alexandra Trkola, Nadia Wohlwend, Cinzia Zehnder, Aitana Neves, Adrian Egli
26 April 2022 - O0959
Molecular epidemiological characterisation of a Swiss legacy collection of methicillin-resistant Staphylococcus aureus (MRSA)
Vanni Benvenga, Aline Cuénod, Srinithi Purushothaman, Gottfried Dasen, Helena Seth-Smith, Tim Roloff, Adrian Egli
24 April 2022 - O0504
Comprehensive genomic investigation into in-host evolution of vancomycin resistant Enterococcus faecium over 3.5 years
Helena Seth-Smith, Ana Durovic, Tim Roloff, Marco Meola, Carlo Casanova, Sarah Tschudin-Sutter, Adrian Egli
24 April 2022 - O0344
Bacterial genome-wide association study identifies papGII to be associated with invasive uropathogenic E. coli infections
Aline Cuénod, Jessica Agnetti, Helena Seth-Smith, Tim Roloff, Sarah Tschudin-Sutter, Stefano Bassetti, Nicholas R. Thomson, Adrian Egli
23 April 2022 - P1186
Optimising conditions for rapid metagenomics screening of multidrug-resistant pathogens
Srinithi Purushothaman, Marco Meola, Stefanie Heller, Danica Nogarth, Tim Roloff, Adrian Egli
23 April 2022 - P0869
Whole genome-based characterisation of Campylobacter jejuni from human patients with gastroenteritis collected over an 18-year period (2003-2020)
Giovanni Ghielmetti, Helena M.b. Seth-Smith, Tim Roloff, Nicole Cernela, Roger Stephan, Adrian Egli
23 April 2022 - P1015
Factors impacting the pre-analytical quality of blood cultures: a tertiary care centre analysis
Lucas Romann, Laura Werlen, Anja Hermann, Isabelle Gisler Ries, Stefano Bassetti, Roland Bingisser, Martin Siegemund, Tim Roloff, Veronika Muigg, Vladimira Hinic, Maja Weisser, Michael Osthoff, Fabian Franzeck, Adrian Egli
23 April 2022 - P1147
Diagnostic challenges within the Bacillus cereus-group: finding the beast without teeth
Veronika Muigg, Aline Cuénod, Srinithi Purushothaman, Martin Siegemund, Matthias Wittwer, Valentin Pflüger, Kristina M. Schmidt, Maja Weisser, Nicole Ritz, Andreas Widmer, Daniel Goldenberger, Vladimira Hinic, Tim Roloff, Kirstine K. Soegaard, Adrian Egli, Helena Seth-Smith
23 April 2022 - L0527
S-gene target failure as an effective surveillance tool for monitoring the introduction of all dominant SARS-CoV-2 variants of concern (VOC) in Switzerland and Liechtenstein: tracking Alpha, Delta, Omicron BA.1 and Omicron BA.2
Dominique Hilti, Faina Wehrli, Nadia Wohlwend, Sabine Berchtold, Yacir Salimi, Mauro Imperiali, Susanna Bigler, Anna Roditscheff, Barbara Schnell, Konrad Egli, Helena Seth, Tim Roloff, Philipp Kohler, Christian Kahlert, Adrian Egli, Thomas Bodmer, Lorenz Risch, Martin Risch
2021
External Quality Assessment of SARS-CoV-2 Sequencing: an ESGMD-SSM Pilot Trial across 15 European Laboratories
Journal of Clinical Microbiology, 2021 Jan. DOI:https://doi.org/10.1128/JCM.01698-21
Fanny Wegner, Tim Roloff, Michael Huber, Samuel Cordey, Alban Ramette, Yannick Gerth, Claire Bertelli, Madlen Stange, Helena M. B.Seth-Smith, Alfredo Mari, Karoline Leuzinger, Lorenzo Cerutti, Keith Harshman, Ioannis Xenarios, Philippe Le Mercier, Pascal Bittel, Stefan Neuenschwander, Onya Opota, Jonas Fuchs, Marcus Panning, Charlotte Michel, Marie Hallin, Thomas Demuyser, Ricardo De Mendonca, Paul Savelkoul, Jozef Dingemans, Brianvan der Veer, Stefan A.Boers, Eric C. J.Claas, Jordy P. M.Coolen, Willem J. G.Melchers, Marianne Gunell, Teemu Kallonen, Tytti Vuorinen, Antti J.Hakanen, Eva Bernhoff, Marit Andrea Klokkhammer Hetland, HadarGolan Berman, Sheera Adar, Jacob Moran-Gilad, Dana G.Wolf, Stephen L.Leib, Oliver Nolte, Laurent Kaiser, Stefan Schmutz, Verena Kufner, MaryamZaheri, AlexandraTrkola, Hege VangsteinAamot, Hans H.Hirsch, GilbertGreub AdrianEgli
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