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ECCMID 2023
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From the archive: ECCMID and more before 2010
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14 September 2022 - P2-30
Optimizing the gene-by-gene approach for bacterial typing with chewBBACA 3
Rafael Mamede, P. Vila-Cerqueira, M. Ramirez
14 September 2022 - P2-32
Enabling high resolution typing of Streptococcus pyogenes with a novel whole-genome multilocus sequence typing schema
Rafael Mamede, A. Friães, M. Ferreira, J. Melo-Cristino, M. Ramirez
14 September 2022 - P1-1
Herding the LMAS: Evaluating metagenomic long and short de novo assembly
Inês Mendes, P. Vila-Cerqueira, Y. Motro, J. Moran-Gilad, J. A. Carriço, M. Ramirez
12 July 2021 - 3410
Short-read metagenomic assembly: finding the best fit in a world of options
Catarina Inês Mendes, C.I. Mendes (1), P. Vila-Cerqueira (1), Y. Motro (2), J. Moran-Gilad (2), J.A. Carriço (1), M. Ramirez (1)
10 July 2021 - 4023
Emergence of blaNDM-producing Klebsiella pneumoniae in critically ill patients with SARS-CoV-2 infection admitted to an intensive care unit in San Jose, Costa Rica
Manuel Ramirez-Cardoce, M. Ramirez-Cardoce, N. Rojas-Solis
10 July 2021 - 2596
Novel treatment for pneumococcal meningitis: an innovative brain-targeted immunoliposome for antimicrobial drug delivery
Sandra Aguiar, S. Aguiar (1), M.M. Gaspar (2), M. Silva (1), M. Ferreira (1), D. Martins (1), A. André (1), J.N. Dias (1), V. Neves (3), L. Gano (4), J.D.G. Correia (4), J. Carriço (3), M. Ramirez (3), J. Melo-Cristino (3), J. Gonçalves (2), M. Castanho (2), F. Aires-Da-Silva (1)
09 July 2021 - 4175
Fast, faster, fastest: improving an allele calling algorithm for whole genome multilocus sequence typing (wgMLST)
Rafael Mamede, R. Mamede, P. Vila-Cerqueira, M. Ramirez
09 July 2021 - 2368
Bacterial infections in intensive care unit adult patients with COVID-19: experience from a reference teaching hospital in San Jose, Costa Rica
Manuel Ramirez-Cardoce, M. Ramirez-Cardoce, N. Solis-Rojas
09 July 2021 - 4265
Defining publicly available whole genome multilocus sequence typing schemas: the example of Streptococcus pyogenes
Pedro Vila-Cerqueira, P. Vila-Cerqueira, R. Mamede, A. Friães, M. Ramirez
09 July 2021 - 3650
Methicillin-resistant Staphylococcus aureus (MRSA) invasive infections: epidemiology and risk-factors for mortality in bacteraemic patients in Porto Alegre, Brazil
Cezar Vinicius Würdig Riche, C.V. Würdig Riche (1), R. Mamede (2), D. Falci (3), J. Carrico (2), M. Ramirez (2), C. Dias (1)
09 July 2021 - 781
Eosinophilic granulomatosis with polyangiitis in HIV patient: a case report
Marlon Arcegono, M. Arcegono, C. Ramos, A.T. Magbitang-Santiago, L.T. Aleta, M. Ramirez-Quizon, M.J. Festin, S. Sanidad, A. Flora, J.L. Compuesto, M.B. Quiambao, D.K. Salazar-Paras
09 July 2021 - 4305
Successful dissemination of KPC-3 and OXA-181 carbapenemases in different genetic backgrounds of Klebsiella pneumoniae from Portuguese hospitals
Nuno Alexandre Faria, N.A. Faria (1), T. Touret (2), A.S. Simões (2), M. Pinto (3), J. Melo-Cristino (4), M. Ramirez (5), C. Toscano (6), E. Gonçalves (6), F. Martins (6), A.S. Bispo (7), C. Palos (7), P. Pereira (7), A.B. Correia (8), L. Gonçalves (8), M. Serrano (9), H. De Lencastre (10, 11), A. Duarte (12), J.A. Carriço (5), R. Sá-Leão (2), M. Miragaia (1)
09 July 2021 - 218
The usefulness of the FilmArray® BCID panel in the detection of bacteraemia: results of the first multi-centre study in Latin America
Rolando Soloaga, R. Soloaga (1), G. Algorta (2), F. Badia (2), M. Blanco (3), N. Carrion (1), A. Dagatti (4), L. Decca (4), G. D'urso (3), L. Errecalde (5), A. Galiana (6), D. Godoy (3), L. Guelfand (5), C. Maldonado (4), S. Montibello (5), M. Mota (2), J. Ortellado (7), H. Parra (8), S. Perez Catalan (9), J. Pidone (1), M. Ramirez Cardoce (10), R. Rollet (11), M. Ruvas Kiese (7), E. Segura Retana (10), H. Sobrero (2), A. Togneri (9), G. Velazquez Aguayo (7), M. Vieytes (6), D. Vaustat (11)
23 April 2018 - O0760
The INNUENDO platform: a user-friendly platform for the integration of high-throughput sequencing in bacterial food-borne pathogen surveillance
Bruno Ribeiro Gonçalves, B. Ribeiro Gonçalves, M. Paulo Machado, M. Silva, J. Halkilahti, A. Jaakonen, M. Ramirez, M. Rossi, J. Carriço
21 April 2018 - O0138
Plasmid atlas: plasmid visual analytics and identification in high-throughput sequencing data
Tiago Jesus, T. Jesus, B. Ribeiro Gonçalves, D. Silva, V. Bortolaia, M. Ramirez, J. Carriço
12 April 2016 - EP0089
Changing serotypes of Streptococcus agalactiae causing invasive infections in adults in Portugal (2009-2014)
Elisabete Raquel Ferreira Martins, Ferreira Martins Elisabete Raquel, E. Ferreira Martins, T. Fernandes, E. Lopes, J. Melo-Cristino, M. Ramirez
11 April 2016 - EP0101
Comparison of Streptococcus pyogenes isolates from invasive and skin and soft tissue infections reveal differences in the capacity to interact with host proteins
Catarina Pato, Pato Catarina, C. Pato, A. Friães, M. Ramirez, J. Melo-Cristino
11 April 2016 - EP0107
Group B streptococcal (GBS) colonization among non-pregnant adults in Portugal: prevalence, serotypes, genetic lineages and resistance
Elisabete Raquel Ferreira Martins, Ferreira Martins Elisabete Raquel, E. Ferreira Martins, J. Melo-Cristino, M. Ramirez
11 April 2016 - P0981
Group B streptococcal neonatal infections in IS : 1979 – 2014
Erla Soffía Björnsdóttir, Novak Anita, Björnsdóttir Erla Soffía, E. Björnsdóttir, E. Martins, H. Erlendsdóttir, M. Ramirez, G. Haraldsson, J. Melo-Cristino, K. Kristinsson
09 April 2016 - EV0283
Diversification and emerging resistance among the hypervirulent CC17 clone of Streptococcus agalactiae
Elisabete Raquel Ferreira Martins, Ferreira Martins Elisabete Raquel, Poortahmasebi Vahdat, E. Ferreira Martins, C. Roussado, J. Melo-Cristino, M. Ramirez
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